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STRINGSTRING
GRMZM2G052288_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G052288_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G052288_P01annotation not available (487 aa)    
Predicted Functional Partners:
100191445
Ornithine aminotransferase mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (472 aa)
   
 
  0.968
GRMZM2G174671_P01
Arginase 1 mitochondrial; Belongs to the arginase family (340 aa)
   
 
  0.958
cl4656_1
Hydrolase, carbon-nitrogen family; Uncharacterized protein (300 aa)
       
  0.957
100282933
Spermidine synthase 1; Uncharacterized protein ; Belongs to the spermidine/spermine synthase family (387 aa)
   
  0.842
pco075678
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family (318 aa)
   
  0.842
pco081586c
Spermine synthase; Belongs to the spermidine/spermine synthase family (387 aa)
   
  0.842
100272866
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family (333 aa)
   
  0.842
spesyn
Spermidine synthase ; Belongs to the spermidine/spermine synthase family (389 aa)
   
  0.842
GRMZM2G001405_P01
annotation not available (418 aa)
   
   
 
0.802
100274319
Diaminopimelate decarboxylase 2 chloroplastic; Belongs to the Orn/Lys/Arg decarboxylase class-II family (412 aa)
   
   
 
0.801
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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