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STRINGSTRING
GRMZM2G052688_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G052688_P01" - ATBRCA1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G052688_P01ATBRCA1 (631 aa)    
Predicted Functional Partners:
rad51a
DNA repair protein RAD51 homolog A; Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily (340 aa)
     
 
  0.944
GRMZM2G080314_P01
Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (666 aa)
     
0.943
FHA2
DNA damage signaling and repair protein (557 aa)
     
 
  0.908
GRMZM2G481027_P01
annotation not available (368 aa)
     
 
  0.850
103636271
DNA mismatch repair protein MLH1 (724 aa)
     
 
  0.850
GRMZM2G340282_P01
annotation not available (632 aa)
     
 
  0.850
GRMZM2G128938_P01
annotation not available (1596 aa)
     
 
  0.850
GRMZM2G464523_P01
annotation not available (350 aa)
       
 
  0.847
GRMZM2G425751_P01
annotation not available (429 aa)
       
 
  0.847
GRMZM2G425747_P01
annotation not available (117 aa)
       
 
  0.847
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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