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Zm.83850 protein (Zea mays) - STRING interaction network
"Zm.83850" - ATBRCA1 in Zea mays
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.83850ATBRCA1 (631 aa)    
Predicted Functional Partners:
RAD51A
DNA repair protein RAD51 homolog A (Rad51-like protein A)(RAD51A)(ZmRAD51a); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
 
    0.821
GRMZM2G461447_P01
Hypothetical protein LOC100384551 (759 aa)
     
        0.703
ZmPCNA2
Proliferating cell nuclear antigen2 ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
 
    0.586
GRMZM2G076329_P01
DNA binding protein (876 aa)
     
 
    0.586
PCNA
Proliferating cell nuclear antigen (PCNA); This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
 
    0.584
H4C7
Histone H4 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
 
    0.552
DMT105
DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37)(Chromomethylase 3)(DNA methyltransferase 105); May be involved in the CpXpG methylation and in gene silencing (915 aa)
     
        0.548
GRMZM2G421279_P01
Histone H4 (103 aa)
     
 
    0.524
pco076382
Hypothetical protein LOC100272286 (307 aa)
     
 
    0.505
GRMZM2G475899_P01
Histone H3.2 (245 aa)
     
 
    0.505
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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