STRINGSTRING
Zm.130980 protein (Zea mays) - STRING interaction network
"Zm.130980" - RNA binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.130980RNA binding protein (261 aa)    
Predicted Functional Partners:
GRMZM2G082931_P01
Glycine-rich RNA-binding protein 7 (316 aa)
   
     
  0.822
pco114428
Hypothetical protein LOC100272607 (346 aa)
       
      0.733
GRMZM2G163297_P01
ELAV-like protein 4 (129 aa)
   
 
    0.724
GRMZM2G077797_P01
RNA binding protein (166 aa)
   
 
    0.722
pco085368
LOC100283837 (140 aa)
   
 
    0.716
RAB15
Glycine-rich RNA-binding, abscisic acid-inducible protein ; Possibly has a role in RNA transcription or processing during stress (159 aa)
   
 
    0.701
Zm.72715
Uncharacterized protein (113 aa)
   
 
    0.692
GRMZM5G841101_P01
Hypothetical protein LOC100217196 (287 aa)
   
 
    0.685
GRMZM2G473389_P01
THO complex subunit 7B-like (272 aa)
       
      0.678
GRMZM2G116681_P02
Ngg1 interacting factor 3 like 1 binding protein 1 (LOC100283954), mRNA (315 aa)
       
      0.678
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]