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GRMZM2G053642_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G053642_P01" - pre-mRNA-splicing factor 18-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G053642_P01pre-mRNA-splicing factor 18-like (373 aa)    
Predicted Functional Partners:
Zm.67016
Putative uncharacterized protein (1236 aa)
     
 
  0.951
GRMZM2G142157_P01
Putative uncharacterized protein (282 aa)
     
 
  0.841
GRMZM2G057026_P01
pre-mRNA-splicing factor SLU7 (310 aa)
     
 
  0.841
pco124238
Hypothetical protein LOC100191798 (721 aa)
       
 
  0.804
Zm.103612
pre-mRNA-splicing factor ATP-dependent RNA helicase (722 aa)
       
 
  0.804
GRMZM2G443256_P01
SMAD/FHA domain-containing family protein (710 aa)
     
 
  0.768
AC233850.1_FGP008
Annotation not available (669 aa)
     
 
  0.768
Zm.132899
Putative uncharacterized protein At4g01020, chloroplastic-like (1719 aa)
     
 
  0.762
GRMZM2G437262_P01
Annotation not available (170 aa)
     
 
  0.761
Zm.2850
Uncharacterized protein (940 aa)
     
 
  0.761
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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