STRINGSTRING
GRMZM2G053991_P02 protein (Zea mays) - STRING interaction network
"GRMZM2G053991_P02" - Membrane protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G053991_P02Membrane protein (LOC100280464), mRNA (308 aa)    
Predicted Functional Partners:
GRMZM2G432480_P02
Phosphate import ATP-binding protein pstB 1 (341 aa)
         
  0.743
GRMZM2G129428_P01
Hypothetical protein LOC100384828 (518 aa)
           
  0.549
Zm.2957
Nucleic acid binding protein (519 aa)
           
  0.549
Zm.33190
Metal transporter NRAT1-like (551 aa)
           
  0.546
GRMZM2G353250_P01
Uncharacterized protein (112 aa)
           
  0.529
C2H35
LOC100282635 (467 aa)
           
  0.529
GRMZM2G072071_P01
ATP-binding cassette sub-family B member 10 (648 aa)
     
   
  0.463
MATE1
MATE family protein (563 aa)
     
   
  0.460
GRMZM2G163154_P01
Hypothetical protein LOC100383875 (553 aa)
           
  0.459
Zm.4157
Uncharacterized LOC103644215 (213 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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