STRINGSTRING
GRMZM2G054410_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G054410_P01" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G054410_P01Uncharacterized protein (437 aa)    
Predicted Functional Partners:
GRMZM2G431402_P01
Annotation not available (348 aa)
 
   
  0.688
Zm.95011
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (566 aa)
 
 
  0.684
Zm.3885
Pectin methylesterase1 (pme1), mRNA (563 aa)
 
 
  0.680
Zm.94163
Pectinesterase (562 aa)
 
 
  0.680
Zm.146678
Pectinesterase-like (574 aa)
 
   
  0.679
GRMZM2G128549_P01
Hypothetical protein LOC100278720 (728 aa)
 
   
  0.679
GRMZM2G057278_P01
Annotation not available (338 aa)
 
   
  0.679
GRMZM2G144454_P01
Annotation not available (387 aa)
 
   
  0.677
GRMZM2G410783_P01
Annotation not available (505 aa)
 
   
  0.676
GRMZM2G121278_P01
Probable pectinesterase 55 (337 aa)
 
   
  0.675
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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