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umc1399 protein (Zea mays) - STRING interaction network
"umc1399" - Coiled-coil domain-containing protein 25 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1399Coiled-coil domain-containing protein 25; Uncharacterized protein (216 aa)    
Predicted Functional Partners:
pco137895
Protein RCC2; Putative regulator of chromosome condensation (RCC1) family protein (549 aa)
   
   
  0.740
100276378
AMMECR1 family (218 aa)
           
  0.707
GRMZM2G449197_P01
Ribonuclease (277 aa)
     
   
  0.600
103640768
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (297 aa)
     
   
  0.600
100217212
Multifunctional methyltransferase subunit TRM112-like protein (131 aa)
     
        0.598
100502028
Polyprenol reductase 2 (359 aa)
     
   
  0.582
cl34681_1b
Polyprenol reductase 2 (303 aa)
     
   
  0.582
GRMZM2G063544_P01
annotation not available (522 aa)
     
   
  0.534
GRMZM2G058970_P01
annotation not available (608 aa)
     
   
  0.534
GRMZM2G436593_P01
Mitochondrial 2-oxoglutarate/malate carrier protein ; Belongs to the mitochondrial carrier (TC 2.A.29) family (326 aa)
           
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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