STRINGSTRING
Zm.16834 protein (Zea mays) - STRING interaction network
"Zm.16834" - Uncharacterized LOC103648029 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.16834Uncharacterized LOC103648029 (1131 aa)    
Predicted Functional Partners:
GRMZM2G479744_P01
Uncharacterized LOC103645720 (627 aa)
     
   
  0.619
Zm.354
Glossy1 (621 aa)
           
  0.545
GRMZM2G083526_P01
Hypothetical protein LOC100280351 (627 aa)
           
  0.545
GRMZM2G029912_P01
Hypothetical protein LOC100192547 (635 aa)
           
  0.545
ms26
Hypothetical protein LOC100191749 (543 aa)
           
  0.532
pco115177
LOC100282873 (530 aa)
           
  0.531
phd11
Hypothetical protein LOC100384509 (689 aa)
           
  0.461
GRMZM2G145179_P01
4-coumarate--CoA ligase 2 (610 aa)
           
  0.457
GRMZM2G014651_P01
4-coumarate--CoA ligase 2 (610 aa)
           
  0.457
Zm.155603
Uncharacterized LOC100280338 (1960 aa)
           
  0.431
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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