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STRINGSTRING
gpm282 protein (Zea mays) - STRING interaction network
"gpm282" - Expansin-B4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm282Expansin-B4; Belongs to the expansin family (294 aa)    
Predicted Functional Partners:
GRMZM2G327266_P01
Expansin-B4; Belongs to the expansin family (296 aa)
     
     
0.788
expa1
Alpha-expansin 1; Alpha-expansin 10; Uncharacterized protein (253 aa)
     
   
0.561
100283053
1-aminocyclopropane-1-carboxylate oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family (317 aa)
           
  0.534
GRMZM2G025870_P01
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Flavonol synthase/flavanone 3-hydroxylase; Uncharacterized protein ; Belongs to the iron/ascorbate-dependent oxidoreductase family (408 aa)
           
  0.532
100276306
Uncharacterized protein (104 aa)
     
        0.529
542740
Glutathione S-transferase IV; Uncharacterized protein ; Belongs to the GST superfamily (224 aa)
           
  0.475
100280285
Pectinesterase (563 aa)
     
        0.461
100282672
Protein SRG1; Naringenin,2-oxoglutarate 3-dioxygenase; Uncharacterized protein ; Belongs to the iron/ascorbate-dependent oxidoreductase family (362 aa)
           
  0.457
100280212
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (519 aa)
     
        0.434
100192462
Aspartyl protease AED3; Belongs to the peptidase A1 family (431 aa)
     
        0.424
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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