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STRINGSTRING
csu378 protein (Zea mays) - STRING interaction network
"csu378" - Ubiquitin-conjugating enzyme E2 variant 1C in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csu378Ubiquitin-conjugating enzyme E2 variant 1C; Belongs to the ubiquitin-conjugating enzyme family (161 aa)    
Predicted Functional Partners:
100283953
Ubiquitin carrier protein; Ubiquitin-conjugating enzyme E2-22 kDa ; Belongs to the ubiquitin-conjugating enzyme family (197 aa)
     
 
  0.842
TIDP9204
STIP1 homology and U box-containing protein 1; STIP1 y and U box-containing protein 1; Uncharacterized protein (275 aa)
     
 
  0.841
GRMZM2G406643_P01
annotation not available (141 aa)
     
 
  0.808
103633261
Ubiquitin-60S ribosomal protein L40-1; Ubiquitin fusion protein; Uncharacterized protein (129 aa)
     
 
  0.808
AC233910.1_FGP003
UBiQuitin family member (143 aa)
     
 
  0.808
103651370
annotation not available (153 aa)
     
 
  0.800
GRMZM2G115828_P03
Putative ubiquitin-conjugating enzyme family; Ubiquitin-conjugating enzyme E2 N (155 aa)
     
 
  0.800
100281972
Putative ubiquitin-conjugating enzyme family; Ubiquitin-conjugating enzyme E2 N; Uncharacterized protein ; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
     
 
  0.800
GRMZM2G007122_P02
Putative ubiquitin-conjugating enzyme family; Uncharacterized protein ; Belongs to the ubiquitin-conjugating enzyme family (154 aa)
     
 
  0.800
GRMZM5G880306_P01
annotation not available (530 aa)
     
 
  0.776
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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