STRINGSTRING
cl27593_1 protein (Zea mays) - STRING interaction network
"cl27593_1" - LOC100281658 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl27593_1LOC100281658 (720 aa)    
Predicted Functional Partners:
GRMZM2G119249_P02
Shikimate kinase family protein (273 aa)
           
  0.721
cl604_1
LOC100284193 (cl604_1), mRNA (143 aa)
           
  0.721
Zm.16839
Pto kinase interactor 1 (356 aa)
       
 
  0.631
GRMZM2G452875_P01
Annotation not available (247 aa)
       
 
  0.560
GRMZM2G159860_P01
Annotation not available (302 aa)
       
 
  0.560
GRMZM2G148959_P01
Annotation not available (266 aa)
       
 
  0.560
GRMZM2G145704_P02
Annotation not available (341 aa)
       
 
  0.560
pza00381
Hypothetical protein LOC100383056 (901 aa)
       
 
  0.560
Zm.20791
Uncharacterized LOC103633224 (960 aa)
       
 
  0.560
GRMZM2G039096_P01
Annotation not available (244 aa)
       
 
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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