STRINGSTRING
cl52289_1b protein (Zea mays) - STRING interaction network
"cl52289_1b" - Hypothetical protein LOC100272620 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl52289_1bHypothetical protein LOC100272620 (261 aa)    
Predicted Functional Partners:
Orphan56
Protein phosphatase 2C ABI2 (484 aa)
       
 
  0.760
PP2C1
Probable protein phosphatase 2C 53 (459 aa)
       
 
  0.760
PP2C7
Protein phosphatase 2C ABI2 (423 aa)
       
 
  0.717
TRAF17
Hypothetical protein LOC100274226 (272 aa)
       
 
  0.538
GRMZM2G421163_P03
Hypothetical protein LOC100193665 (492 aa)
           
  0.491
Orphan346
Hypothetical protein LOC100274431 (539 aa)
       
      0.461
GRMZM2G038691_P01
GAMYB-binding protein (536 aa)
       
      0.461
GRMZM5G844225_P02
Annotation not available (154 aa)
           
  0.418
Zm.27220
Uncharacterized protein (1189 aa)
           
  0.418
GRMZM2G408308_P01
Kinesin-like protein (477 aa)
           
  0.418
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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