STRINGSTRING
c3h38 protein (Zea mays) - STRING interaction network
"c3h38" - Hypothetical protein LOC100193411 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3h38Hypothetical protein LOC100193411 (358 aa)    
Predicted Functional Partners:
GRMZM2G003930_P04
Hypothetical protein LOC100194121 (271 aa)
     
   
  0.728
Zm.144885
E3 ubiquitin-protein ligase ATL42-like (391 aa)
           
  0.721
pck2
Hypothetical protein LOC100279748 (659 aa)
           
  0.720
GRMZM5G886044_P01
Hypothetical protein LOC100193137 (306 aa)
       
    0.644
GRMZM2G338896_P01
Annotation not available (142 aa)
       
    0.644
GRMZM2G123305_P01
Exosome complex exonuclease RRP43 (306 aa)
       
    0.644
AC207655.2_FGP002
Annotation not available (142 aa)
       
    0.644
e2f14
Transcription factor E2FB-like (548 aa)
     
  0.641
GRMZM2G098236_P02
Annotation not available (1036 aa)
       
  0.627
rph1
RNase PH homolog (242 aa)
       
    0.622
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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