• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G057026_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G057026_P01" - Pre-mRNA-splicing factor SLU7-A in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G057026_P01Pre-mRNA-splicing factor SLU7-A (310 aa)    
Predicted Functional Partners:
GRMZM2G404377_P01
MIF4G domain-containing protein / MA3 domain-containing protein (177 aa)
     
 
  0.986
AC203535.4_FGP001
CDC5 protein (925 aa)
     
 
  0.981
GRMZM2G057394_P02
ATP-dependent RNA helicase DDX23; Uncharacterized protein ; Belongs to the DEAD box helicase family (758 aa)
     
 
  0.980
TIDP3207
Zinc finger CCCH domain-containing protein 4 (493 aa)
     
 
  0.974
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.969
GRMZM5G838403_P01
Pre-mRNA-splicing factor of RES complex protein (531 aa)
     
 
  0.966
103647704
annotation not available (1450 aa)
     
 
  0.965
103654338
Microfibrillar-associated protein-related (430 aa)
     
   
  0.954
cl7007_1
GCIP-interacting family protein (353 aa)
     
 
  0.953
GRMZM2G102447_P02
Uncharacterized protein (367 aa)
     
 
  0.953
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (13%) [HD]