STRINGSTRING
pco127416b protein (Zea mays) - STRING interaction network
"pco127416b" - Hypothetical protein LOC100194219 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco127416bHypothetical protein LOC100194219 (173 aa)    
Predicted Functional Partners:
Atg7
Autophagy-related 7 (1021 aa)
       
      0.646
Zm.452
Putative uncharacterized protein Fragment (770 aa)
           
  0.546
GRMZM2G167999_P01
WD repeat-containing protein 48-like (753 aa)
           
  0.545
GRMZM2G001541_P01
Hypothetical protein LOC100192884 (602 aa)
           
  0.545
AC234203.1_FGP010
Hypothetical protein LOC100272615 (602 aa)
           
  0.545
GRMZM2G398124_P01
Uncharacterized protein (169 aa)
           
  0.454
GRMZM2G079022_P01
Uncharacterized protein (70 aa)
           
  0.454
GRMZM2G012154_P01
Annotation not available (70 aa)
           
  0.454
GRMZM2G363229_P01
Antiporter/ drug transporter/ transporter (532 aa)
           
  0.435
Zm.159963
Symbiotic ammonium transporter (341 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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