STRINGSTRING
pco100771 protein (Zea mays) - STRING interaction network
"pco100771" - LOC100283631 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco100771LOC100283631 (270 aa)    
Predicted Functional Partners:
GRMZM2G065105_P01
Hypothetical protein LOC100193631 (256 aa)
     
 
  0.843
GRMZM2G131525_P01
Syntaxin-related protein KNOLLE (1063 aa)
       
 
  0.773
GRMZM2G100478_P01
Syntaxin-related protein KNOLLE-like (314 aa)
       
 
  0.773
VAP27
Hypothetical protein LOC100191705 (244 aa)
     
      0.708
IDP2392
Hypothetical protein LOC100280363 (250 aa)
       
      0.650
Zm.9852
Syntaxin 121 (306 aa)
       
 
  0.527
Zm.22955
Uncharacterized protein (241 aa)
       
 
  0.513
Zm.3781
Syntaxin 132 (367 aa)
       
 
  0.513
GRMZM2G021378_P01
Hypothetical protein LOC100384255 (307 aa)
       
 
  0.513
GRMZM2G587327_P01
Hypothetical protein LOC100382060 (741 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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