• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100382012 protein (Zea mays) - STRING interaction network
"100382012" - RING-H2 finger protein ATL80 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100382012RING-H2 finger protein ATL80 (185 aa)    
Predicted Functional Partners:
GRMZM2G013546_P01
Uncharacterized protein (327 aa)
           
  0.734
GRMZM2G536644_P01
Molecular chaperone Hsp40/DnaJ family protein (488 aa)
           
  0.711
GRMZM2G054076_P01
Chaperone protein dnaJ (567 aa)
           
  0.711
tdsgR52D10
annotation not available (1056 aa)
           
  0.563
100193815
Putative LOB domain-containing family protein; Uncharacterized protein (265 aa)
           
  0.563
100285881
Polygalacturonase (426 aa)
           
  0.562
100279297
UDP-Glycosyltransferase superfamily protein (417 aa)
       
 
  0.544
100284565
Vegetative storage protein 2 (153 aa)
           
  0.487
100282109
Stem glycoprotein (216 aa)
           
  0.487
100273245
Cysteine proteinase inhibitor; Multicystatin; Multicystatin isoform 1; Multicystatin isoform 2; Uncharacterized protein ; Belongs to the cystatin family. Phytocystatin subfamily (176 aa)
           
  0.487
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]