STRINGSTRING
pco086826a protein (Zea mays) - STRING interaction network
"pco086826a" - LOC100283149 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco086826aLOC100283149 (248 aa)    
Predicted Functional Partners:
GRMZM2G169927_P01
Hypothetical protein LOC100383756 (651 aa)
           
  0.721
GRMZM2G011456_P03
Hypothetical protein LOC100273548 (653 aa)
           
  0.721
Zm.16861
40S ribosomal protein S10 (179 aa)
           
  0.530
GRMZM2G030839_P05
Phosphomevalonate kinase (512 aa)
           
  0.530
pco117356b
LOC100280854 (208 aa)
           
  0.529
GRMZM2G068436_P01
PIT1 (205 aa)
           
  0.527
umc2246
Hypothetical protein LOC100272867 ; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (249 aa)
           
  0.469
Zm.96357
60S ribosomal protein L31 (123 aa)
           
  0.467
TIDP3261
60S ribosomal protein L31 (124 aa)
           
  0.467
GRMZM2G011253_P01
60S ribosomal protein L31 (127 aa)
           
  0.467
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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