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STRINGSTRING
cl862_1 protein (Zea mays) - STRING interaction network
"cl862_1" - Polyadenylate-binding protein RBP45C in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl862_1Polyadenylate-binding protein RBP45C (434 aa)    
Predicted Functional Partners:
tdsgR34C09
annotation not available (612 aa)
     
 
  0.810
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.792
GRMZM2G125151_P01
Uncharacterized protein (686 aa)
     
 
  0.753
GRMZM2G014323_P01
annotation not available (1201 aa)
       
 
  0.668
GRMZM2G340076_P01
annotation not available (583 aa)
       
      0.667
gpm167a
Putative cyclin-dependent kinase A family protein; Uncharacterized protein ; Belongs to the protein kinase superfamily (292 aa)
       
      0.667
pco133105a
Uncharacterized protein; Putative cyclin-dependent kinase A family protein; Uncharacterized protein ; Belongs to the protein kinase superfamily (294 aa)
       
      0.667
cdc2
Cell division control protein 2 homolog; Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily (294 aa)
       
      0.667
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
       
 
  0.634
AC203535.4_FGP001
CDC5 protein (925 aa)
       
 
  0.610
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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