STRINGSTRING
pco077553 protein (Zea mays) - STRING interaction network
"pco077553" - LOC100283163 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco077553LOC100283163 (416 aa)    
Predicted Functional Partners:
Zm.121933
Uncharacterized transmembrane protein DDB_G0289901-like (1564 aa)
     
  0.963
Zm.23836
Hornerin-like (1499 aa)
     
  0.963
pco075430a
Hypothetical protein LOC100272776 (428 aa)
     
  0.955
GRMZM2G145879_P01
Hypothetical protein LOC100273893 (429 aa)
     
  0.955
cl17437_1
LOC100284562 (471 aa)
     
  0.951
GRMZM2G398736_P02
CDK-activating kinase assembly factor MAT1 family protein (194 aa)
     
  0.932
GRMZM2G147814_P01
CDK-activating kinase assembly factor MAT1 family protein (194 aa)
     
  0.932
GRMZM2G390729_P01
Uncharacterized protein (446 aa)
     
  0.871
GRMZM2G479378_P01
Uncharacterized protein (393 aa)
     
  0.870
GRMZM2G390516_P01
Annotation not available (223 aa)
     
  0.870
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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