STRINGSTRING
Zm.85565 protein (Zea mays) - STRING interaction network
"Zm.85565" - Nucleotide binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.85565Nucleotide binding protein (LOC100280725), mRNA (622 aa)    
Predicted Functional Partners:
Zm.95519
pre-mRNA-processing factor 17-like (572 aa)
     
      0.924
Zm.1204
pre-mRNA-splicing factor PRP17 (572 aa)
     
      0.924
GRMZM2G307567_P01
Uncharacterized LOC103626737 (1364 aa)
     
      0.898
GRMZM2G474599_P02
Annotation not available (558 aa)
     
      0.897
GRMZM2G351363_P02
Annotation not available (635 aa)
     
      0.897
pco093291
Hypothetical protein LOC100191855 (526 aa)
     
      0.897
GRMZM2G132671_P01
Uncharacterized protein (264 aa)
     
      0.897
GRMZM2G102429_P01
Annotation not available (84 aa)
     
      0.897
GRMZM2G040385_P01
Annotation not available (91 aa)
     
      0.897
GRMZM2G037698_P01
pre-mRNA-splicing factor 19 (526 aa)
     
      0.897
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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