STRINGSTRING
PHD13 protein (Zea mays) - STRING interaction network
"PHD13" - LOC100281389 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHD13LOC100281389 (558 aa)    
Predicted Functional Partners:
HOX1A
Putative uncharacterized protein ; Interacts with the shrunken (SHR) 26 bp feedback control element (442 aa)
           
  0.721
LOB38
Hypothetical protein LOC100382144 (299 aa)
           
  0.720
TAZ1
Hypothetical protein LOC100191305 (344 aa)
           
  0.530
GRMZM2G099491_P01
Hypothetical protein LOC100191200 (379 aa)
           
  0.463
Zm.92950
Hypothetical protein LOC100275404 (549 aa)
           
  0.461
GRMZM2G151087_P02
Hypothetical protein LOC100274548 (221 aa)
           
  0.407
grf2
14-3-3-like protein GF14-12 (900 aa)
     
   
  0.406
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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