STRINGSTRING
Zm.4200 protein (Zea mays) - STRING interaction network
"Zm.4200" - Protein phosphatase 2C in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4200Protein phosphatase 2C (408 aa)    
Predicted Functional Partners:
GRMZM2G180916_P04
Hypothetical protein LOC100216611 (337 aa)
   
  0.994
pco148380b
Hypothetical protein LOC100191986 (366 aa)
   
  0.994
GRMZM2G138861_P04
Serine/threonine-protein kinase SAPK8 (366 aa)
   
  0.994
PYL3
Hypothetical protein LOC100383950 (188 aa)
       
  0.980
GRMZM2G066867_P01
Hypothetical protein LOC100191972 (362 aa)
   
  0.973
Zm.96954
Cyclase/dehydrase family protein (212 aa)
       
  0.965
GRMZM2G133631_P01
Hypothetical protein LOC100273048 (197 aa)
       
  0.964
GRMZM2G437627_P01
Annotation not available (133 aa)
   
  0.952
GRMZM2G399067_P01
CASP-like protein (368 aa)
   
  0.952
Zm.84875
Putative protein kinase (453 aa)
   
  0.952
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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