STRINGSTRING
Zm.94138 protein (Zea mays) - STRING interaction network
"Zm.94138" - AGP16 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.94138AGP16 (75 aa)    
Predicted Functional Partners:
Zm.1046
Lipid transfer-like protein VAS (175 aa)
     
        0.786
Zm.295
Fae2 protein (515 aa)
     
        0.786
gpm893
LOC100280449 (616 aa)
     
        0.730
Zm.142719
AGP16 (76 aa)
     
        0.725
GRMZM2G151651_P01
Hypothetical protein LOC100193358 (166 aa)
     
        0.698
Zm.102456
Phosphoribosylanthranilate transferase (774 aa)
     
        0.618
pco080326c
Hypothetical protein LOC100274164 (456 aa)
     
        0.592
umc1162
LOC100283627 (239 aa)
     
        0.469
AY110473
Hypothetical protein LOC100279500 (1064 aa)
     
        0.468
Zm.84126
LOC100283184 (430 aa)
     
        0.466
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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