STRINGSTRING
mTRF10 protein (Zea mays) - STRING interaction network
"mTRF10" - Hypothetical protein LOC100194019 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mTRF10Hypothetical protein LOC100194019 (389 aa)    
Predicted Functional Partners:
GRMZM2G035042_P01
IMP dehydrogenase/GMP reductase (668 aa)
           
  0.721
pco110026
Polyubiquitin containing 7 ubiquitin monomers (381 aa)
         
  0.563
MubC5
Polyubiquitin (535 aa)
         
  0.563
GRMZM2G319109_P01
Uncharacterized LOC103630315 (794 aa)
         
  0.531
GRMZM2G335419_P01
LOC100280691 (398 aa)
           
  0.529
cl44044_1b
LOC100284044 (546 aa)
           
  0.529
Zm.83711
Clathrin assembly protein (LOC100284872), mRNA (388 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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