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STRINGSTRING
spr1 protein (Zea mays) - STRING interaction network
"spr1" - Signal recognition particle protein subunit 9 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spr1Signal recognition particle protein subunit 9 (625 aa)    
Predicted Functional Partners:
GRMZM2G325453_P01
annotation not available (309 aa)
   
 
  0.978
pco109407
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
 
 
  0.955
100217058
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
 
 
  0.955
100276798
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
 
 
  0.955
GRMZM2G701405_P01
annotation not available (60 aa)
     
 
  0.936
GRMZM2G466947_P01
Ribosomal protein L9/RNase H1 (350 aa)
     
 
  0.936
100283769
Signal recognition particle receptor beta subunit; Signal recognition particle receptor beta subunit isoform 1; Signal recognition particle receptor beta subunit isoform 2; Signal recognition particle receptor beta subunit isoform 3 ; Belongs to the small GTPase superfamily. Arf family (256 aa)
     
 
  0.936
GRMZM2G059260_P01
annotation not available (166 aa)
     
 
  0.936
pco129304b
Signal recognition particle binding; Belongs to the small GTPase superfamily. Arf family (256 aa)
     
 
  0.936
GRMZM5G805293_P01
50S ribosomal protein L33, chloroplastic (66 aa)
 
 
 
  0.918
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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