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Emp5 protein (Zea mays) - STRING interaction network
Emp5 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emp5Emp5 protein (776 aa)    
Predicted Functional Partners:
atp6
ATP synthase subunit a (F-ATPase protein 6) (410 aa)
           
  0.624
GRMZM5G820250_P01
Cytochrome c oxidase subunit 3 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide III) (280 aa)
           
  0.570
cox3
Cytochrome c oxidase subunit 3 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide III); Subunits I, II and III form the functional core of the enzyme complex (280 aa)
           
  0.566
nad9
NADH dehydrogenase subunit 9 (190 aa)
           
  0.521
Zm.21536
SURF1 (344 aa)
     
   
  0.497
GRMZM2G052457_P01
Uncharacterized protein (434 aa)
       
 
  0.467
GRMZM2G059981_P01
Hypothetical protein LOC100384526 (233 aa)
       
 
  0.464
GRMZM2G058563_P01
Annotation not available (804 aa)
           
  0.459
cox1
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide I); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (528 aa)
           
  0.457
GRMZM2G444502_P01
Annotation not available (117 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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