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SR45_1 protein (Zea mays) - STRING interaction network
"SR45_1" - Serine/arginine-rich splicing factor SR45-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SR45_1Serine/arginine-rich splicing factor SR45-like (429 aa)    
Predicted Functional Partners:
GRMZM2G028096_P02
Hypothetical protein LOC100273852 (410 aa)
     
        0.641
WAK
Hypothetical protein LOC100304375 (731 aa)
           
  0.566
Zm.25447
Putative uncharacterized protein (866 aa)
     
 
    0.493
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
     
 
    0.489
IDP825
DNA-directed RNA polymerase II 36 kDa polypeptide A (328 aa)
     
 
    0.473
Zm.43566
116 kDa U5 small nuclear ribonucleoprotein component-like (525 aa)
     
 
    0.473
GRMZM2G077541_P01
YLS5 (LOC100280536), mRNA (387 aa)
     
        0.450
Zm.10045
Uncharacterized protein (1472 aa)
     
 
    0.442
RS2Z37A
Hypothetical protein LOC100382130 (325 aa)
     
 
    0.437
mta1
Hypothetical protein LOC100191912 (206 aa)
     
 
    0.437
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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