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hcp101b protein (Zea mays) - STRING interaction network
"hcp101b" - Hypothetical protein LOC100381502 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcp101bHypothetical protein LOC100381502 (175 aa)    
Predicted Functional Partners:
Zm.134236
Uncharacterized LOC100502129 (742 aa)
       
 
  0.902
GRMZM2G151387_P01
Hypothetical protein LOC100381870 (732 aa)
       
 
  0.902
Zm.37708
Formin-like protein 5 (743 aa)
       
 
  0.902
pco091329
Hypothetical protein LOC100381399 (517 aa)
       
      0.733
hda108
Histone deacetylase (458 aa)
     
  0.726
hda101
Probable histone deacetylase 19 (EC 3.5.1.98)(RPD3 homolog); Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity) (517 aa)
     
  0.713
pco095363
Hypothetical protein LOC100276617 (469 aa)
     
  0.713
GRMZM2G442936_P01
Annotation not available (196 aa)
     
  0.707
GRMZM2G424380_P01
Annotation not available (78 aa)
     
  0.707
GRMZM2G397843_P01
Annotation not available (944 aa)
     
  0.707
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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