STRINGSTRING
GRMZM2G060856_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G060856_P01" - Membrane protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G060856_P01Membrane protein (68 aa)    
Predicted Functional Partners:
GRMZM2G386228_P01
Protein transport protein Sec61 beta subunit (107 aa)
     
    0.907
GRMZM2G342693_P01
Uncharacterized protein (81 aa)
     
    0.907
GRMZM2G045971_P01
Uncharacterized protein (55 aa)
     
    0.907
Zm.13940
Protein transport protein Sec61 beta subunitPutative uncharacterized protein ; (81 aa)
     
    0.907
Zm.92288
Protein transport protein SEC61 gamma subunit (69 aa)
     
 
    0.691
GRMZM2G089491_P01
Protein transport protein SEC61 gamma subunit (69 aa)
     
 
    0.691
AC208023.3_FGP001
Protein transport protein SEC61 gamma subunit (69 aa)
     
 
    0.691
Zm.144404
Hypothetical protein LOC100276798 (475 aa)
     
  0.662
pco109407
Hypothetical protein LOC100280289 (475 aa)
     
  0.662
GRMZM2G073498_P01
Hypothetical protein LOC100217058 (475 aa)
     
  0.662
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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