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STRINGSTRING
pco104380 protein (Zea mays) - STRING interaction network
"pco104380" - Ubiquitin receptor RAD23c in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco104380Ubiquitin receptor RAD23c (386 aa)    
Predicted Functional Partners:
GRMZM2G095931_P01
annotation not available (549 aa)
       
 
  0.939
103654835
Ubiquitin family protein (409 aa)
     
 
  0.924
pco129049
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (495 aa)
     
 
  0.912
GRMZM2G173416_P02
annotation not available (212 aa)
     
 
  0.912
rps19
30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
     
 
  0.899
103639061
Putative ubiquitin conjugation factor E4 (1029 aa)
     
 
  0.898
103636597
annotation not available (1031 aa)
     
 
  0.898
100272940
26S proteasome non-ATPase regulatory subunit 4-like protein (400 aa)
     
 
  0.890
100283637
26S proteasome non-ATPase regulatory subunit 4 (401 aa)
     
 
  0.890
tdsgR83B08
26S proteasome non-ATPase regulatory subunit 4-like protein (401 aa)
     
 
  0.890
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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