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Zm.1980 protein (Zea mays) - STRING interaction network
"Zm.1980" - Hypothetical protein LOC100193990 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.1980Hypothetical protein LOC100193990 (LOC100193990), mRNA (237 aa)    
Predicted Functional Partners:
mybr73
Hypothetical protein LOC100382063 (162 aa)
           
  0.721
bzip80
Transcription factor HY5 (138 aa)
           
  0.721
HB127
Hypothetical protein LOC100273913 (294 aa)
           
  0.721
mads77
Uncharacterized protein (214 aa)
           
  0.721
pco113991
LOC100281072 (231 aa)
           
  0.721
eil8
ETHYLENE INSENSITIVE 3-like 5 protein (429 aa)
           
  0.721
pco132275a
Hypothetical protein LOC100194394 (245 aa)
           
  0.561
pco152469
LOC100283461 (254 aa)
     
        0.403
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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