STRINGSTRING
GRMZM2G062348_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G062348_P01" - Uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G062348_P01Uncharacterized protein (288 aa)    
Predicted Functional Partners:
Atg8b
Autophagy-related 8c (120 aa)
       
      0.877
Atg8a
LOC100240694 (119 aa)
       
      0.877
Atg8d
Autophagy-related 8e (119 aa)
       
      0.877
GRMZM2G076826_P01
Autophagy-related 8c (120 aa)
       
      0.877
GRMZM2G014975_P01
Autophagy-related 8e (Atg8e), mRNA (138 aa)
       
      0.877
GRMZM2G056645_P01
Hypothetical protein LOC100381565 (2552 aa)
     
   
  0.632
GRMZM5G854930_P01
Carboxylic ester hydrolase (401 aa)
     
      0.612
GRMZM2G443542_P01
Annotation not available (114 aa)
       
      0.612
GRMZM2G427351_P01
Carboxylic ester hydrolase (318 aa)
       
      0.612
GRMZM2G325504_P01
Annotation not available (196 aa)
       
      0.612
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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