STRINGSTRING
Zm.5545 protein (Zea mays) - STRING interaction network
"Zm.5545" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5545Uncharacterized protein (1330 aa)    
Predicted Functional Partners:
Zm.7333
Kinesin heavy chain Fragment (1081 aa)
     
 
  0.832
Zm.98275
Hypothetical protein LOC100216627 (1388 aa)
     
        0.787
Zm.4944
Kinesin heavy chain Fragment (1017 aa)
     
 
  0.778
Zm.146
Cyclin3 (424 aa)
     
        0.773
myb117
Putative uncharacterized protein (858 aa)
     
        0.772
Zm.22004
Uncharacterized protein (837 aa)
     
        0.754
Zm.82140
Putative uncharacterized protein (904 aa)
     
 
  0.744
GRMZM2G064503_P01
Uncharacterized protein (707 aa)
     
        0.706
Zm.32056
Putative uncharacterized protein (760 aa)
     
 
  0.705
PP2C29
2C-type protein phosphatase protein (813 aa)
       
      0.693
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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