STRINGSTRING
bsd2 protein (Zea mays) - STRING interaction network
"bsd2" - Bundle sheath defective2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bsd2Bundle sheath defective2 (129 aa)    
Predicted Functional Partners:
psa6
Photosystem I reaction center6 (134 aa)
     
   
  0.935
PSBQ
Oxygen-evolving enhancer protein 3-1, chloroplastic Precursor (OEE3)(16 kDa subunit of oxygen evolving system of photosystem II)(OEC 16 kDa subunit) (217 aa)
     
   
  0.839
pco077228
Geranylgeranyl hydrogenase (457 aa)
     
   
  0.826
pco086004
LOC100286220 (194 aa)
     
        0.817
GRMZM2G157007_P01
50S ribosomal protein L40 (148 aa)
     
        0.808
cl11315_1a
Hypothetical protein LOC100278360 (154 aa)
     
        0.805
Zm.29388
Oil yellow1 ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (459 aa)
     
        0.804
Zm.126512
Uncharacterized protein (545 aa)
     
        0.801
pcr1
Protochlorophyllide reductase A (387 aa)
     
   
  0.801
Zm.431
Sigma-like factor6 (542 aa)
     
        0.800
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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