STRINGSTRING
tac931.17a protein (Zea mays) - STRING interaction network
"tac931.17a" - Agmatine deiminase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tac931.17aAgmatine deiminase (414 aa)    
Predicted Functional Partners:
cl4656_1
LOC100282130 (300 aa)
 
   
  0.991
AY110562
Hypothetical protein LOC100193626 (639 aa)
       
  0.965
GRMZM2G156486_P01
Hypothetical protein LOC100280276 (356 aa)
 
   
  0.828
Zm.39046
Arginine decarboxylase 1 (694 aa)
 
   
  0.826
IDP634
Hypothetical protein LOC100279870 (362 aa)
 
   
  0.826
bas1
Beta alanine synthase1 (343 aa)
 
   
  0.809
GRMZM2G120578_P01
Spermidine synthase 1 (387 aa)
         
  0.739
pco081586c
Hypothetical protein LOC100279222 (387 aa)
         
  0.739
spds2
Spermidine synthase (389 aa)
         
  0.739
Zm.94986
LOC100282908 (318 aa)
         
  0.728
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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