STRINGSTRING
cl14140_1 protein (Zea mays) - STRING interaction network
"cl14140_1" - LOC100282110 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl14140_1LOC100282110 (267 aa)    
Predicted Functional Partners:
GRMZM2G117207_P01
Protein YIP1 (258 aa)
     
 
  0.910
Zm.155133
Protein YIPF5 homolog (258 aa)
     
 
  0.910
GRMZM2G415476_P01
Annotation not available (89 aa)
     
 
  0.806
Zm.19350
LOC100284081 (276 aa)
     
 
  0.806
GRMZM2G129234_P01
Hypothetical protein LOC100273791 (275 aa)
     
 
  0.806
GRMZM2G100351_P01
Annotation not available (59 aa)
     
 
  0.806
GRMZM2G046025_P01
Yip1 domain family member 6 (276 aa)
     
 
  0.806
GRMZM2G373738_P01
Uncharacterized protein (254 aa)
     
 
  0.494
GRMZM2G340458_P01
Annotation not available (285 aa)
     
 
  0.494
Zm.158245
Ras-related protein RABD2c-like (205 aa)
     
 
  0.494
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]