STRINGSTRING
abi11 protein (Zea mays) - STRING interaction network
"abi11" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abi11Uncharacterized protein (193 aa)    
Predicted Functional Partners:
Zm.33542
Hypothetical protein LOC100193946 (LOC100193946), mRNA (283 aa)
           
  0.721
IDP832
Hypothetical protein LOC100275071 (159 aa)
           
  0.721
ABI31
B3 domain-containing protein Os01g0905400-like (694 aa)
           
  0.666
nrt2.2
Putative high affinity nitrate transporter (524 aa)
           
  0.620
ABI12
B3 domain-containing protein Os02g0683500-like (409 aa)
           
  0.567
VP14
9-cis-epoxycarotenoid dioxygenase 1, chloroplastic Precursor (EC 1.13.11.51)(Protein VIVIPAROUS14)(VP-14); Has a 11,12(11’,12’) 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Not active on the all-trans isomers of violaxanthin and neoxanthin. Contributes probably to abscisic acid synthesis for the induction of seed dormancy (604 aa)
           
  0.561
VP1
Regulatory protein viviparous-1 ; Transcriptional activator specifically required for expression of the maturation program in the seed development. Probably potentiates the response to the seed-specific hormone abscisic acid (ABA). May bind to DNA indirectly (691 aa)
           
  0.560
RPS11
40S ribosomal protein S11 (159 aa)
           
  0.530
abi51
DNA binding protein (232 aa)
           
  0.529
GRMZM2G158734_P01
Hypothetical protein LOC100193064 (360 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]