STRINGSTRING
S22 protein (Zea mays) - STRING interaction network
"S22" - 40S ribosomal protein S20 Fragment in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S2240S ribosomal protein S20 Fragment (S22) (126 aa)    
Predicted Functional Partners:
GRMZM2G436038_P01
Annotation not available (340 aa)
   
  0.999
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
  0.999
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
     
  0.999
Zm.124974
UBiQuitin family member (143 aa)
     
  0.999
GRMZM2G389240_P01
Uncharacterized protein (195 aa)
     
  0.999
RPS11
40S ribosomal protein S11 (159 aa)
   
  0.999
cl25046_1a
40S ribosomal protein S14 (Clone MCH2) (166 aa)
   
  0.999
pco131882
LOC100283974 (279 aa)
   
  0.999
pco152633a
Hypothetical protein LOC100274530 (146 aa)
   
  0.999
Zm.85881
40S ribosomal protein S11 (571 aa)
   
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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