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STRINGSTRING
100285364 protein (Zea mays) - STRING interaction network
"100285364" - Ribonucleoprotein A in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100285364Ribonucleoprotein A (268 aa)    
Predicted Functional Partners:
RNC1
Ribonuclease III domain-containing protein RNC1, chloroplastic; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)
     
        0.902
542081
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released (568 aa)
   
        0.895
GRMZM2G068982_P01
Methionine aminopeptidase (341 aa)
     
      0.894
103651490
annotation not available (601 aa)
     
      0.894
100280147
Protease Do-like 2 chloroplastic (601 aa)
     
      0.889
103630659
Rbcl rna s1-binding domain protein2 (513 aa)
     
      0.867
ij1
Protein Iojap, chloroplastic; May be a ribosome silencing factor (Potential). Involved in plastid biogenesis. Plastids affected by a mutation in Iojap lose the ability to perform translation and lack plastid ribosomes; Belongs to the Iojap/RsfS family (228 aa)
     
      0.865
103641124
Pentatricopeptide repeat*-59040; Plastid transcriptionally active 12-like protein (600 aa)
     
      0.859
100284899
Multiple organellar RNA editing factor 9 chloroplastic; DAG protein isoform 1; DAG protein isoform 2; Uncharacterized protein (223 aa)
     
        0.858
GRMZM2G161668_P03
Uncharacterized protein (292 aa)
     
        0.854
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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