STRINGSTRING
Zm.30485 protein (Zea mays) - STRING interaction network
"Zm.30485" - LOC100286373 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.30485LOC100286373 (581 aa)    
Predicted Functional Partners:
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
    0.621
Zm.124974
UBiQuitin family member (143 aa)
       
    0.621
DER1.2
Derlin-1.2 (ZmDerlin1-2); May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins (243 aa)
     
  0.594
DER1.1
Derlin-1.1 (ZmDerlin1-1); May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins (243 aa)
     
  0.594
DER2.2
Derlin-2.2 (ZmDerlin2-2); May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
     
  0.594
DER2.1
Derlin-2.1 (ZmDerlin2-1); May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
     
  0.594
GRMZM2G386985_P01
Annotation not available (111 aa)
     
  0.571
pco110021
40S ribosomal protein S27a (155 aa)
       
    0.559
pco108118f
LOC100282222 (191 aa)
       
    0.557
Zm.160680
ubiquitin-NEDD8-like protein RUB2 (153 aa)
       
    0.557
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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