STRINGSTRING
Zm.3465 protein (Zea mays) - STRING interaction network
"Zm.3465" - SCAR-like protein 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Zm.3465SCAR-like protein 2 (1415 aa)    
Predicted Functional Partners:
GRMZM2G113174_P01
Putative uncharacterized protein (507 aa)
     
  0.971
BRK1
Protein BRICK1 ; Promotes multiple, actin-dependent cell polarization events in the developing leaf epidermis. Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (84 aa)
       
  0.971
Zm.130396
Uncharacterized protein (184 aa)
     
  0.958
Zm.5783
Uncharacterized protein (709 aa)
     
  0.943
GRMZM2G447432_P01
Uncharacterized protein (334 aa)
     
  0.943
GRMZM2G323609_P01
Annotation not available (369 aa)
     
  0.943
GRMZM2G180150_P01
Putative uncharacterized protein (150 aa)
     
  0.943
GRMZM2G128308_P01
Annotation not available (147 aa)
     
  0.943
GRMZM2G387576_P01
Arp2/3 complex 21 kDa subunit ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (178 aa)
       
  0.869
GRMZM2G134402_P01
Arp2/3 complex 21 kDa subunit ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (180 aa)
       
  0.869
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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