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pco100749b protein (Zea mays) - STRING interaction network
"pco100749b" - SNF7 family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco100749bSNF7 family protein; Belongs to the SNF7 family (230 aa)    
Predicted Functional Partners:
GRMZM2G126860_P01
Vacuolar sorting protein 4b ; Belongs to the AAA ATPase family (522 aa)
     
  0.987
GRMZM2G088834_P03
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family (435 aa)
     
  0.987
GRMZM2G381649_P01
Vacuolar protein sorting-associated protein 32 homolog 1; Belongs to the SNF7 family (228 aa)
     
 
  0.956
GRMZM2G094781_P01
Uncharacterized protein; Belongs to the SNF7 family (317 aa)
     
 
  0.954
pco072268
Vacuolar protein sorting-associated protein 2 homolog 1; Belongs to the SNF7 family (223 aa)
     
 
  0.931
103647208
Charged multivesicular body protein 2a ; Belongs to the SNF7 family (223 aa)
     
 
  0.931
GRMZM2G046676_P01
Charged multivesicular body protein 2a ; Belongs to the SNF7 family (229 aa)
     
 
  0.928
pco100001
Vacuolar protein sorting-associated protein 2 homolog 3; Charged multivesicular body protein 2b; Uncharacterized protein ; Belongs to the SNF7 family (212 aa)
     
 
  0.928
umc2756
LYST-interacting protein 5-like protein (477 aa)
     
 
  0.927
GRMZM2G047178_P01
LYST-interacting protein 5-like protein (559 aa)
     
 
  0.927
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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