STRINGSTRING
umc1162 protein (Zea mays) - STRING interaction network
"umc1162" - LOC100283627 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1162LOC100283627 (239 aa)    
Predicted Functional Partners:
Zm.1046
Lipid transfer-like protein VAS (175 aa)
     
        0.787
Zm.295
Fae2 protein (515 aa)
     
        0.787
gpm65
Xyloglucan endotransglucosylase/hydrolase ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (297 aa)
     
        0.786
gpm470
LOC100281790 (203 aa)
     
        0.782
ZmGR1b
GR1a protein (133 aa)
     
        0.777
expB4
Beta-expansin 4 (308 aa)
     
        0.771
GRMZM2G162276_P01
Hypothetical protein LOC100273254 (133 aa)
     
        0.757
Orphan250
Hypothetical protein LOC100273157 (499 aa)
           
  0.721
AY110473
Hypothetical protein LOC100279500 (1064 aa)
     
        0.669
pco080326c
Hypothetical protein LOC100274164 (456 aa)
     
        0.621
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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