STRINGSTRING
Zm.24845 protein (Zea mays) - STRING interaction network
"Zm.24845" - Uncharacterized BCR, COG1963 family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.24845Uncharacterized BCR, COG1963 family protein (265 aa)    
Predicted Functional Partners:
GRMZM2G068703_P01
Uncharacterized LOC103630682 (103 aa)
   
          0.527
GRMZM2G172091_P01
Annotation not available (103 aa)
   
          0.503
GRMZM2G161693_P08
Putative uncharacterized protein (103 aa)
   
          0.503
Zm.127360
NFU3 (266 aa)
   
   
  0.456
Zm.80050
NFU3 (226 aa)
   
   
  0.454
pco128171
Hypothetical protein LOC100192708 (276 aa)
         
  0.454
AY110393
LOC100286236 (221 aa)
         
  0.454
GRMZM2G010056_P03
Hemolysin A (293 aa)
   
        0.450
GRMZM2G496833_P01
Annotation not available (124 aa)
              0.448
Zm.21123
1-deoxy-D-xylulose 5-phosphate synthase (727 aa)
              0.448
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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