STRINGSTRING
GRMZM2G071869_P04 protein (Zea mays) - STRING interaction network
"GRMZM2G071869_P04" - Hypothetical protein LOC100276618 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G071869_P04Hypothetical protein LOC100276618 (177 aa)    
Predicted Functional Partners:
GRMZM2G150160_P01
Hypothetical protein LOC100191811 (447 aa)
           
  0.546
GRMZM2G102181_P01
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (374 aa)
           
  0.546
GRMZM2G076827_P02
Hypothetical protein LOC100194279 (458 aa)
           
  0.546
GRMZM2G092432_P01
ACR8 (432 aa)
           
  0.457
Zm.5501
Hypothetical protein LOC100194266 (729 aa)
           
  0.457
Zm.38247
Uncharacterized LOC103628982 (443 aa)
           
  0.457
GRMZM2G423575_P01
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (110 aa)
           
  0.455
GRMZM2G450217_P01
Uncharacterized LOC103634794 (208 aa)
           
  0.454
GRMZM2G393301_P01
Uncharacterized protein (209 aa)
           
  0.454
GRMZM2G031993_P01
Uncharacterized protein (244 aa)
           
  0.454
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (13%) [HD]