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STRINGSTRING
100382147 protein (Zea mays) - STRING interaction network
"100382147" - Cactin in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100382147Cactin (500 aa)    
Predicted Functional Partners:
cl19935_1b
UPF0235 protein (232 aa)
     
 
  0.905
SR45_1
annotation not available (429 aa)
       
 
  0.891
pco131393
Splicing factor, arginine/serine-rich 7; Splicing factor, arginine/serine-rich 7 isoform 1; Splicing factor, arginine/serine-rich 7 isoform 2; Splicing factor, arginine/serine-rich 7 isoform 3; Splicing factor, arginine/serine-rich 7 isoform 4; Uncharacterized protein (184 aa)
           
  0.686
SR45_2
Arginine/serine-rich splicing factor SR45_2 transcript II (422 aa)
       
      0.668
magi26728
Arginine/serine-rich splicing factor RSP41 isoform 1; Arginine/serine-rich splicing factor RSP41 isoform 2; Arginine/serine-rich splicing factor RSP41 isoform 3; Uncharacterized protein (255 aa)
     
      0.546
SRP1
Arginine/serine-rich splicing factor 1 variant 3 isoform 3; Uncharacterized protein (223 aa)
     
      0.546
542693
Serine/arginine-rich splicing factor RS31A (239 aa)
     
      0.546
pco104267
LisH/CRA/RING-U-box domains-containing protein (390 aa)
           
  0.536
nta1
Uncharacterized protein (364 aa)
           
  0.534
LOC542179
U1 snRNP (491 aa)
     
 
  0.533
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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