STRINGSTRING
Zm.23401 protein (Zea mays) - STRING interaction network
"Zm.23401" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.23401Uncharacterized protein (879 aa)    
Predicted Functional Partners:
GRMZM2G005256_P02
Hypothetical protein LOC100191678 (718 aa)
     
        0.635
GRMZM2G169927_P01
Hypothetical protein LOC100383756 (651 aa)
     
        0.433
Zm.15935
Hypothetical protein LOC100192696 ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
        0.421
GRMZM2G036019_P02
Hypothetical protein LOC100280396 (1077 aa)
     
        0.410
Zm.25174
DNA-directed RNA polymerase I subunit rpa2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1162 aa)
     
        0.404
GRMZM2G378994_P01
Annotation not available (242 aa)
     
        0.404
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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