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STRINGSTRING
baf1 protein (Zea mays) - STRING interaction network
"baf1" - Barren stalk fastigiate 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baf1Barren stalk fastigiate 1; Uncharacterized protein (341 aa)    
Predicted Functional Partners:
hda102
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (432 aa)
       
 
  0.705
BA1
Transcription factor bHLH83; Barren stalk1; Uncharacterized protein (219 aa)
           
  0.685
BAD1
BRANCH ANGLE DEFECTIVE 1; TCP transcription factor; Uncharacterized protein (276 aa)
           
  0.683
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (458 aa)
       
 
  0.604
brl2
annotation not available (1118 aa)
           
  0.566
100285382
Boron transporter 1; Uncharacterized protein (709 aa)
     
   
  0.565
100284398
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (234 aa)
           
  0.562
tu1
Tunicate1; MADS transcription factor; Putative MADS-box transcription factor family protein; Uncharacterized protein (281 aa)
           
  0.560
103630771
Tassel sheath1 (284 aa)
           
  0.560
fea3
Fasciated ear3 (506 aa)
           
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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