STRINGSTRING
pco122658 protein (Zea mays) - STRING interaction network
"pco122658" - Hypothetical protein LOC100191823 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco122658Hypothetical protein LOC100191823 (626 aa)    
Predicted Functional Partners:
GRMZM2G466519_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (209 aa)
   
   
  0.719
AC199439.4_FGP005
Uncharacterized protein (679 aa)
   
 
  0.663
IPT7
Isopentenyl transferase IPT7 (352 aa)
   
   
  0.660
ipt3B
Uncharacterized protein (354 aa)
   
   
  0.660
ipt3
Adenylate isopentenyltransferase-like (348 aa)
   
   
  0.660
ipt6
Isopentenyl transferase IPT6 (338 aa)
   
   
  0.660
IPT4
Isopentenyl transferase IPT4 (364 aa)
   
   
  0.660
Zm.117570
Isopentenyl transferase (453 aa)
   
   
  0.660
Zm.29197
Isopentenyl transferase IPT1 (470 aa)
   
   
  0.660
IPT2
Isopentenyl transferase IPT2 (322 aa)
   
   
  0.660
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]